Thursday, October 19, 2017

Book Purchase: Adam's Quest

I hate it when books come out that escape my attention.  Such is the case with a book titled Adam's Quest, by Tim Stafford.  In it, Stafford has interviewed eleven scientists who have struggled with their understanding of how their faith fits in with their pursuit of science.  In a sense, this is like the book Four Views on the Historical Adam, in that it surveys Christians from different perspectives.  He has interviewed young earth creationists, supporters of intelligent design and evolutionary creationists.

As readers of this blog will note, I have been extremely critical of young earth creationists and intelligent design supporters, not so much for their beliefs (which I also find issue with, though) but for their ham-handed and often deceptive way in which they treat the scientific evidence for an ancient earth and evolution.  At least Todd Wood, one of the assembled scientists, has also had issue with this and, from what little I have read of Kurt Wise, he has as well.

Patheos has a short introduction to the book, which focuses on the first group, the young earth creationists, and some of their consternation at the way that science is examined.  There is a passage with a particularly damning quote from Kurt Wise about this:
After that, Wise lost interest in creationist apologetics, especially as he began to realize that many of the creationist evidences from his reading were wrong. “At first I thought it was ignorance.” As he learned more though, he became convinced that the mistakes in creationist literature were willful. … Wise concluded that for many creationists the end justifies the means. For them, “it doesn’t matter if what you say is true. It matters if it brings people to the right conclusion.” (p. 15-16)
This is, perhaps, why I find people like Ken Ham and his organization, Answers in Genesis so contemptible. They pretend to address the scientific concerns in an honest way but misinterpret evidence, arrive at faulty conclusions and smear hard-working scientists as a matter of course.  As i just told my oldest child, I am not going to come right out say they are lying, but it sure looks like it. 

Perhaps one of the scariest parts of the book and one of the principle reasons that I picked it up are in the sample that is available from Amazon, in which the author recounts his upbringing, which is almost word-for-word what I experienced growing up.  He then recounts every Christian parents' nightmare: the falling away from the faith of one of his children, in part because of the strains of learning correct science and being told that he could not be part of his circle of church friends if he continued to accept an old earth. 

Right now my children are in a home school group that is heavily young earth creation-based and I know that several of the parents of their friends would be horrified if they knew that I was an evolutionary creationist.  I simply don't advertise it. One of them thinks of Ken Ham as a hero of the faith.  How would it be of value for me to confront her with the notion that I think he is a charlatan and a heretic? 

As of yet, my oldest child does not seem to be tracking in any scientific direction so I doubt that this will have a huge impact on his life.  The same does not seem to be true with my second child, who is enamored with botany.  She will hit evolutionary biology head-on in college and I will have to prepare her for that and how to hold onto her faith throughout.  That will be, perhaps the greatest challenge that faces me. 

I look forward to reading this book with interest and would encourage downloading the sample.

Thursday, October 12, 2017

Uh Oh

Answers in Genesis is expanding into Canada, according the its leader, Ken Ham.  Patheos reports the following:
Answers in Genesis, the Creationist ministry run by Ken Ham, is evolving. Ham says that an Answers in Genesis–Canada is scheduled to open in 2018, with an online store launching earlier. It’ll be run by Calvin Smith, an Ontario native who has spoken about Creationism at churches across the nation since 2001.
From the Answers in Genesis website:
According to a recent study, a mere 15% of Canadians have any kind of creationist belief. The church there desperately needs AiG resources to be equipped to stand on the authority of the Word of God and boldly preach the gospel. We’re excited to be part of encouraging and equipping our Canadian brothers and sisters through speaking events, resources, conferences, and more.

AiG produces the world’s leading creation-apologetics resources including books, DVDs, curricula, the Answers Bible Curriculum (used in over 10,000 churches), and one of the top Vacation Bible School (VBS) programs used by over 5,000 churches last year.
For those of us who view Ken Ham's efforts in this direction with great apprehension, this is not good news. As Joel Edmund Anderson and Ted Davis note, Ken Ham preaches heresy and revisionist history. The more I read of the AiG site, the more I am convinced this is true.It is worth quoting Anderson again, here:
The heresy of Ham that is actively “subverting, destabilizing, and destroying” the core of the Christian faith is the claim that a modern, scientific interpretation of Genesis 1-11 as literal history is fundamental prerequisite for the trustworthiness of the Gospel of Christ. It is the claim that if the universe is not 6,000 years old, if there was no historical Adam and Eve, and if there was no worldwide flood 4,000 years ago, then that would make God a liar, that would mean there is no such thing as sin, and that would mean Christ died for nothing. Such a message is heresy, and that message has subverted, destabilized, and destroyed the Christian faith of many people, has destroyed careers, and unfortunately, has taken root within a significant portion of Evangelical Christianity.
Amen.

Wednesday, October 11, 2017

Taboo on Incest May Go Back at Least 34K Years

ZME Science is reporting on a study done from the site of Sunghir, in Russia that preserves “complex social structures,” indicating that, even at 34,000 years ago, there were precautions against inbreeding. Why do we think this?
The Upper Paleolithic burial site contains the complete remains of an adult male, the symbolically incomplete remains of another male, as well as those of two younger individuals. All of these people lived at this site during the same time. Unusual for similar finds from this period, all the four males were buried together.

When a team of scientists at the Cambridge University and the University of Copenhagen analyzed the genomes of these individuals, they were surprised to find they were not closely related. At most, one of the adults was no more related to the boys than a great-great-grandfather.

The researchers speculate that artifacts found at this location, which includes pieces of jewelry, may have been used in ceremonies and rituals that celebrated the exchange of mates between groups. Perhaps such exchanges foreshadowed modern marriage ceremonies.

In addition to the evidence that modern humans formed close-knit communities more than 30,000 years ago, this evidence also indicates that they deliberately sought mates beyond their immediate family.
Humans changed from a promiscuity-based relational strategy to pair-bonding at some point in their evolutionary history, which resulted in more stability.  Read the whole thing. 

Tuesday, October 10, 2017

The Effect of Neandertal DNA on Modern Humans

After the 2013 sequencing of the Neandertal DNA, Janet Kelso, of the Max Planck Institute undertook a study to see what genes present in Neandertals still had an effect on modern humans.  The study employed the data from a genotyping project done by UK Biobank, which surveyed 500,000 people.  What did they find? 
Kelso and her team first narrowed the sample to include only the 112,338 individuals with white European ancestry (whose genomes contain Neanderthal DNA), and used these data to tease out which traits are influenced by Neanderthal genetic variants. The traits they identified included those that affect hair color, skin color, skin tanning and burning, sleeping patterns, mood, and tobacco use.

For example, being a self-described night owl and being prone to daytime napping were both traits positively influenced by Neanderthal variants, as were loneliness, low mood, and smoking. Genetic loci associated with having red hair were found to be devoid of Neanderthal variants, suggesting red-headed Neanderthals were either rare or non-existent. The new study also supports Capra and colleagues’ previous observations that Neanderthal variants are associated with sun-induced skin lesions, mood disorders, and smoking.

That traits such as skin color, sun-burning, and sleep patterns were identified by the analyses might be explained by the Neanderthals’ adaptations to life at more northern latitudes, suggests Capra. But for other traits, he notes, determining how the effects seen in present-day people might once have affected Neanderthals themselves “is one of our crucial challenges.” For example, he says, “of course, Neanderthals were not smoking.”
Maybe I am behind the times but I did not know there was a “trait” for tobacco use. I figured you either did that or you didn't. Like Robin Williams says in Dead Again: either be a smoker or don't be a smoker. Choose it and be it.

I suspect we will continue to find effects of the Neandertal genome, especially since our understanding of how much interbreeding there was continues to change.  It is also a testament to the stability of the human genome that, even after a separation of some several hundred thousand years, interbreeding was still possible.  

Friday, October 06, 2017

Creation Museum Having Positive Impact on Economy of Florence, KY

Cincinnati.com is running a story about the impact that the Creation Museum is having on the economy of a nearby town, Florence, Kentucky.  Chris Mayhew writes:
Comfort Suites opened 84 rooms off Houston Road at 5905 Merchant St., Florence, in July. A busload of tourists from Alabama visiting the Creation Museum and Ark Encounter filled 24 Comfort Suites rooms for three days Sept. 27-29.

Tourism for Newport on the Levee, Downtown Cincinnati and the Creation Museum bring regular visitors, owner Ravi Narsinghani said.

Comfort Suites was Narsinghani's second hotel in Florence he owns with his brother. The brothers will open a third Florence hotel soon.

"We have an upscale extended stay coming," he said.
It is good that the local economies are getting a needed boost from this, even if it is for the wrong reasons.

Thursday, October 05, 2017

NCSE Post Reflecting on Kitzmiller, Twelve Years Later, by Eugenie Scott

NCSE has a guest post by Eugenie Scott, in which she remembers some of the points about Kitzmiller that might not have been public at the time.  It is part one of two.  In the run-up to the Kitzmiller trial, the plaintiffs did not know who the judge would be:
Well, the case was assigned to John E. Jones III, a fiftyish Republican who had been appointed by George W. Bush to the federal bench a few years before. “Intelligent design” proponents were delighted! In their blogs, they were quick to point out that Jones was a mover and shaker in Pennsylvania GOP politics, was a self-described conservative Republican, and was a church-going Lutheran, who certainly would be likely to find the ID policy constitutional.

I must say, our lawyers, who pay attention to judges more than we science types do, were a little apprehensive. What was this guy going to do? He’d only been a federal judge for a couple of years, so there wasn’t much of a record to go on.

His being a person of faith wasn’t an automatic concern. It’s so easy to misconstrue the creationism/evolution controversy falsely as “science versus religion,” when really it is one particular religious perspective versus everyone else’s. People are sometimes surprised to learn that our best allies in support of teaching evolution are other Christians: Catholics and mainstream Protestants— such as Disciples of Christ [with which Transylvania University is affiliated]—don’t want children taught Monday through Friday in science class that God specially created the universe in its present form 6,000 years ago, and then have to straighten them out on Sunday—because their theology is that God created through evolution.
One of the things that came out of the trial was how much the defense lied about what their true motives were. Although her post does not mention these events, it is an interesting account.

Wednesday, October 04, 2017

Why Is Homo floresiensis Still Such a Mystery?

Cosmos Magazine has an article by Debbie Argue, biological anthropologist from Australian National University, about Homo floresiensis and why it has been a struggle to accurately and adequately place this hominin within the framework of human evolution.

 Here was the initial assessment:
Peter Brown and colleagues originally proposed two competing hypotheses about the origins of H. floresiensis. One is that the species is an early hominin similar to the earliest identified in the Homo genus. The fossils for these species are known only from Africa and are between one and two million years old. This implies that the ancestors of H. floresiensis could have got to Flores Island in the vicinity of a million years ago and survived there until at least 60,000 years ago.

Their alternative hypothesis was that H. floresiensis is a dwarfed descendant of Homo erectus, which is the only known non-sapiens hominin to once have existed in Indonesia. Its remains have been found on the island of Java. According to this view, the dwarfing of H. erectus was an evolutionary response to being isolated on an island with a limited food supply. Just as the Asian elephant evolved into the dwarfed Flores stegodon after becoming marooned on the island, H. erectus could have met a similar fate.
It was also proposed that this hominin might have expressed microcephaly.  This idea failed to explain other aspects of the skeleton, however, such as its diminutive height (around 3 feet), long arms and feet and primitive skull features. Here is an image of H. floresiensis compared to a modern human, who had been running around the landscape for at least 100k years while H. floresiensis was extant.



This all saw at least some resolution with the discovery and description of some remains  on another areas of the island Flores that were very similar to the H. floresiensis remains but dated to some 600 thousand years earlier than the remains in Liang Bu.  This lent more credence to the idea that H. floresiensis was, in fact, an offshoot of Homo erectus.

So, Argue, along with Colin Groves, Bill Jungers and Mike Lee, performed statistical tests (this story does not say which kind, a peculiar omission) on a number of different hominin species, comparing them to H. floresiensis.  What did they find?
We therefore hypothesise that H. floresiensis shared a common ancestor with H. habilis. We do not know who that ancestor was or when it lived, but it would have to be older than the oldest H. habilis specimen known, so older than 1.75 million years. The implication is that the H. floresiensis ancestor evolved before that time in Africa, dispersed from that continent, and arrived on Flores earlier than 700,000 years ago, judging by the age of the jaw and teeth found at Soa Basin. This represents a hitherto unknown movement of very early hominins out of Africa.
Presently, the earliest evidence for hominins outside of Africa come from Europe, the Near East and Asia, and date to between 1.5 and 1.8 million years ago. Argue's hypothesis would suggest that H. floresiensis appearance in east Asia represents a separate migration out of African sometime either before or after the wave that saw Homo erectus show up in Trinil and Sangiran, in Indonesia.

Questions still abound as to why this species never saw the evolutionary trajectory that other hominins went through in terms of cranial expansion, increase in height and changes in brachial and crural indices. On the other hand, if evolution proceeds through what we have termed systematics, then advanced traits will show up in related species and if the ancestors of H. floresiensis were cut off, they would just go on their merry way.  We know that such a pattern holds for H. naledi, in South Africa, which coexisted with archaic Homo sapiens, in some way, shape or form. 

The article ends on a very peculiar note, in which she suggests the remote possibility that H. floresiensis is still alive out there, somewhere:
Could the Hobbit still exist in the wild mountain forests of Flores? When H. floresiensis was announced, the media picked up on the local folklore that small human-like creatures roam the forests. Descriptions of sightings are well recorded and quite detailed. The similarity to H. floresiensis is intriguing. But most researchers would say ‘show me the bones!’
This reminds one of the stories involving the Yeti/Sasquatch/Abominable Snowman, which likely derive from the finding of the bones of the Miocene ape Gigantopithecus, which was close to ten feet tall, when standing.  Is H. floresiensis still out there?  Probably not, but I am sure that the cryptozoologists haven't given up hope. 

Tuesday, October 03, 2017

Genetic Model Identifies Paranthropus boisei as Vector For Transmission of Herpes Virus

CNN (usual caveats) reports on a study that identifies Paranthropus boisei as the likely transmission vector of genital HSV-1.  From the story:
Herpes has been around a long time, to say the least.
Ancient chimpanzees genetically passed oral herpes (herpes simplex 1, or HSV-1) to the earliest humans millions of years ago when our lineage split. And we almost missed out on catching that other scourge, genital herpes (HSV-2) -- almost. Unlike HSV-1, HSV-2 didn't make the leap to early humans on its own.
Unfortunately for modern humans, millions of years ago, an early human ancestor was in the right place at the right time to catch HSV-2. And it might not have happened if it weren't for that meddling hominin species Paranthropus boisei, according to a new study in the journal Virus Evolution.
Why Paranthropus boisei, you ask? After all, P. boisei was not even on the main line of human evolution, coexisting with all manner of early Homo species at the same time, who likely out-competed them into extinction.  From the article, which is highly technical:
Paranthropus boisei would have been well placed to act as an intermediate host for HSV2. It most likely contracted the infection through hunting or more likely scavenging infected ancestral-chimpanzee meat. Processing (with or without tools) and consumption of raw meat would act as a simple path for ChHV1 to have crossed into P.boisei via open cuts or sores. Tropical refugia during hot dry periods may have driven chimpanzees into higher concentrations in certain areas, driving them into contact and competition with P.boisei and H.habilis as the margins of tropical forest blended into more open savannah-like habitats (Julier et al. 2017). Violent confrontation or hunting/scavenging and butchery practices would have provided a viable path of transmission for HSV2. Homo habilis remains have been recovered from the same layers as stone tools and bones carrying evidence of butchery, supporting a possible transmission–through-hunting/scavenging hypothesis for the initial anc-chimp to H.habilis transmission (Clarke 2012). Paranthropus aethiopicus, P. boisei, and P. robustus are associated with the Oldowan stone tool complex (De Heinzelin et al. 1999), and P.boisei explicitly with butchery (Domínguez-Rodrigo et al. 2013) lending support to the hypothesis that bushmeat hunting/scavenging and butchery may have led to the initial transmission of HSV2 to the hominins.
The entire exercise is very mathematical and relies on somewhat limited evidence of P. boisei behavior. It is, nonetheless, intriguing since it posits considerable interaction between the various hominin groups. 

Here is a mugshot of one of the perpetrators, the Zinj skull from Olduvai Gorge, found in 1959. 


Saturday, September 30, 2017

Did Humans Become a Distinct Species 350, 000 Years Ago?

The hits just keep on coming.  On the heels of the discovery in Morocco, at Jebel Irhoud, of a skull with some modern characteristics dated to 315 thousand years ago, we now have a genetic study that proposes that our species emerged between 350 and 260 thousand years ago.  How did a genetic study reveal this?  Science News reports:
The trick was retrieving a complete version of the ancient boy’s DNA from his skeleton to compare with DNA from people today and from Stone Age Neandertals and Denisovans. Previously documented migrations of West African farmers to East Africa around 2,000 years ago, and then to southern Africa around 1,500 years ago, reshaped Africans’ genetics — and obscured ancient ancestry patterns — more than has been known, the researchers report online September 28 in Science.
The ancient boy’s DNA was not affected by those migrations. As a result, it provides the best benchmark so far for gauging when Homo sapiens originated in Africa, evolutionary geneticist Carina Schlebusch of Uppsala University in Sweden and her colleagues conclude.
In line with the new genetically derived age estimate for human origins, another team has proposed that approximately 300,000-year-old fossils found in northwestern Africa belonged to H. sapiens (SN: 7/8/17, p. 6). Some researchers suspect a skull from South Africa’s Florisbad site, dated to around 260,000 years ago, qualifies as H. sapiens. But investigators often place our species’ origins close to 200,000 years ago (SN: 2/26/05, p. 141). There is broad consensus that several fossils from that time represent H. sapiens.
What is important to understand is that we have the fossils from Herto and Omo that date to between 150 and 200 thousand but that does not mean that is the earliest time that our species may have actually showed up. The Jebel Irhoud material is only partly modern—in the face mostly—and we do not know how the genetics for this population would look. It is possible that, as some investigators are saying, the Jebel Irhoud material represents the earliest fossil representation of our clade and that over the next 100 thousand years, the modern form fully evolved.   

Q&A With Lee Berger on Human Evolution

The Sunday Times has an interview with Lee Berger about human evolution, in advance of his new book, co-written with John Hawks, Almost Human: The Astonishing Tale of Homo naledi and the Discovery That Changed Our Human Story. As was reported earlier, the original fossils were undated but appeared to be reflective of an early stage in the development of Homo. This idea was shattered when new dates were derived.  As I wrote at the time:
Homo naledi, however, was missing a date—until recently. Nearly everyone in the scientific community thought that the date of the Homo naledi fossils, when calculated, would fall within the same general time period as other primitive early Homo remains. We were wrong. The radiometric dates—recorded using several methods carried out at different laboratories—yielded almost identical ages of between 236 and 300 thousand years before the present (BP). This was an order of magnitude younger than we expected. To say we were surprised would be an understatement.
Interestingly, the interviewer asks no important questions about Homo naledi or the Dinaledi Star cave, itself.  Amid all of the sturm und drang of his tortuous relationships with Ron Clarke and Philip Tobias (✟ 2012), there is one interesting question about human evolution in general:
Throughout the final chapters of the book you often mention how much there still is to learn about Homo naledi and that it’s very likely that there are more early hominim species which are yet to be discovered. The skeletal material you recently came across in the Lesedi Chamber shares similarities with Homo naledi and adds to this statement. What can/does this new discovery tell us about human evolution in Africa?

I think the clear picture that has come from both the discovery of Australopithecus sediba and Homo naledi is that the story of human evolution is not a simple, linear, straightforward one but that ours is a complex history. Naledi and sediba show us that there is more to be found – it’s clear that we don’t really know their ancestral history and the few fossils of other species found across Africa don’t help us much with interpreting where they fit in our family tree – and that’s exciting. We currently are back in the Dinaledi and Lesedi Chambers and making new discoveries – particularly exciting is we seem to have strong evidence that Homo naledi did indeed come down the narrow chute the way our “underground astronauts” come – and that is wonderful and hard to explain – but it’s exciting!
This has been a contentious issue: whether or not the fossil remains were “placed” there or were brought in by scavengers. What is also not clear is if the book was published before the new dates became available, or not.  I will have to buy the book to find that out.  While the rest of the interview is a tad unsubstantive, it is interesting.

Friday, September 29, 2017

Five Peculiar Fossils

Colin Barras of The New Scientist has a very short, very peculiar article on five hominin fossils that have been used to define new species and addresses the validity of each in very cursory fashion.  The strength of the article is in the links that it provides.  About Sahelanthropos, he writes this:
Features at the skull’s rear suggest it sat atop a vertical spine like that of a human, hinting that S. tchadensis walked upright. To make sure, other fossils will be needed – particularly from the legs. Unconfirmed reports suggest that a thigh bone was found with the skull, but this has not yet been discussed in a scientific paper. With so little evidence to go on, some are sceptical that S. tchadensis can really yet be defined as a hominin rather than some other form of ape – yet.
These are the least of its problems, as it is likely a surface find. Aside from this, when Wolpoff and colleagues examined the cranial base, here is what they found:
The prominence of the nuchal muscles, so important in head balance and loading, and shoulder movements, is enhanced by the significant development of the tuberculum linearum. The point is not that the TM 266 cranial rear and posterior portion of the cranial base was unlike hominids because the region looks like apes, but that TM 266 had a posture that is not upright because the region reflects nuchal functions similar to those of apes.

The foramen magnum - orbit plane angle does not directly address posture or locomotion in these hominoid primates (contra Zollikofer et al., 2005). Without a key postcranial element such as a pelvis or femur, none of these data provide compelling evidence for upright posture or obligate bipedal locomotion, and the various details of the nuchal plane argue against it. This functional implication has a phylogenetic consequence—by itself it is sufficient to disprove the phylogenetic hypothesis that TM 266 was a hominid.
This isn't skepticism. This is the door slamming shut.  It can be a surface find and still be a Miocene ape. In my recent piece for BioLogos, it did not occur to me to include this fossil since there are so many problems with it.  At this point, in Africa, the earliest reasonable evidence we have for hominins is Orrorin tugenensis

Read the whole (short) thing.

Thursday, September 28, 2017

Neandertal Child Gives Clues to How They Developed

Gizmodo is running a story about the discovery and examination of a Neandertal child, from El Sidrón Cave, in Spain, who died under mysterious circumstances:
The first step was to determine the chronological age of death by performing a dental analysis. The specimen, dubbed El Sidrón J1, exhibited a mix of baby and adult teeth. Incremental markings on the teeth, which are counted like rings on a tree, showed that the boy died at 7.7 years of age. The skeletal remains exhibited no signs of trauma, no signs of sickness, or any other physical abnormalities. El Sidrón J1, aside from experiencing an untimely death, appears to have been a perfectly normal and healthy Neanderthal child.

The researchers then compared the skeleton’s biological stage of development with what would be expected in a modern human of the same age. To their surprise, they found few differences between the two human subspecies in terms of the pace of growth.

“The comparison...indicate(s) that there was no noticeable difference in the growth and maturation of this Neanderthal juvenile in comparison with modern human juveniles,” said study co-author Luis Rios, a Member of the Paleoanthropology Group at Museo Nacional de Ciencias Naturales, at a press conference held yesterday.
Research has generally shown that Neandertals developed a bit more quickly than modern humans but, in one critical area, this study did not back up that claim.
Perhaps more significantly, analysis of the Neanderthal skull shows that El Sidrón J1's brain was roughly 87.5 percent the size of an average adult Neanderthal at the time of death. The brains of modern humans, on the other hand, reach 95 percent the size of an adult at that age. Previous studies have suggested that the larger brains of Neanderthals underwent rapid growth during these formative years, yet this new research would seem to contradict such claims.
There is a bit of circularity going on here, though because the child is being aged based on dental development and, if for some reason, the dental development does not completely track with either the current estimates or there were some developmental insults, the age might be off.  This is speculation on my part, though.  In any event, it gives us more to understand the developmental biology and ontogeny of these very, very close relatives.  

Wednesday, September 20, 2017

Forbes: Ark Encounter Local Tax Scandal Not Very Scandalous

I bit back I reported on the sale, not once but twice, of the Ark Encounter for $10 that, to all appearances, looked like a tax dodge gone bad.  Now Peter J. Reilly, who has written extensively about the Kent Hovind case, argues that, no it really was not that scandalous.  About the back and forth sale, he writes:
That had me a little excited, but as it turns out there is no federal tax issue. If you look at the Forms 990 filed by Answers in Genesis and Crosswater Canyon, you will find that Crosswater and AIG are both 501(c)(3) organizations and that Ark Encounter LLC is wholly owned by Crosswater making it, absent a special election, a disregarded entity. Transactions between the owner of a disregarded entity and the the disregarded entity are, for federal tax purposes, you know, disregarded. Status as a disregarded entity might not a apply for various local tax purposes. I wrote about an Orthodox Jewish school in Lakewood NJ that got tripped up by that. Apparently a similar rule applies in Kentucky, but I'm not equipped to dig deep there at this point.
Reilly sees that the coverage in the news about the transfer was very one-sided (and I did rely on that for my posts), but that there really was an ethical issue. He continues:
Ark Encounter's complaint of unfair treatment by the media might have some merit. Linda Blackford's coverage appears to me to be pretty solid and balanced, but some of what has been in the blogosphere has not been. For example, consider Dan Arel's headline - Ken Ham Sells Ark Encounter Land To Himself For $10 To Avoid Paying Taxes. I don't see that as a fair characterization as to what happened. Hemant Mehta's treatment on Patheos, though quite critical, is fairer and gives full credit to the new sources. Derek Welch of World Religion News got it backward saying that Ark Encounter sold the property to its subsidiary. The transfer was actually upstream.

On the other hand, I'm not displeased to see how they were hoist on their own petard when they transferred the property to beat the city tax. Overall the whole thing strikes me more as clumsy than smacking of deep conspiracy. All in, I think it was a mistake for the Ark to try to be frugal when it comes to supporting local services. Apparently, they think $500,000 is enough, but anything the city got over and above that would be from higher attendance.
The whole thing certainly left a bad taste in the mouths of the people of the Town, including the mayor. It also struck many, if legal, unethical. For someone like Ham, who decries the downfall of civilization because of moral failure, this seems a tad hypocritical.

Tuesday, September 19, 2017

Monday, September 18, 2017

Greek Fossil Site Vandalized

Someone has vandalized the site containing the 5.7 million year old footprints in Crete.  Australian News Limited reports:
Some four to 10 prints appear to have been hacked out of the rock.

And graffiti has been sprayed over much of the remainder.

It’s an attack with devastating implications for the science of understanding humanity’s past.

“We are fortunate that many of the best tracks remain — the people who did it clearly didn’t know what they were looking for,” Professor Bennett writes. “Our guess is that they were simply intending to sell them.”

The site had been recognised under Greek heritage laws, and local authorities were supposed to be watching it.

Greek media reports a 55-year-old man has been arrested in western Crete and that many of the prints may have been recovered.
I certainly hope so. And I certainly hope that very hefty fines and possibly jail terms will be levied against those involved. As for the people in the organization that was supposed to be watching the site, I hope they are out of a job.

Time will have to tell how much damage was actually done but this is nothing less than a travesty.  Because truly stupid people are never in short supply, many of the Neandertal sites in Europe were also looted before they could be fully excavated.  This should be embarrassing to the Greek government. 

Saturday, September 02, 2017

5.7 Million Year-Old Human Footprints Found on Greek Island of Crete

Great Googlymoogly!  This one is lighting up all over the Internet.  Fossil footprints have been found in the southern Greek Island of Crete, near the village of Trachilos, that appear to have the distinctive heel-toe-off gait of bipedal humans.  The catch? The prints are 5.7 million years old!  From PhysOrg:
Human feet have a very distinctive shape, different from all other land animals. The combination of a long sole, five short forward-pointing toes without claws, and a hallux ("big toe") that is larger than the other toes, is unique. The feet of our closest relatives, the great apes, look more like a human hand with a thumb-like hallux that sticks out to the side. The Laetoli footprints, thought to have been made by Australopithecus, are quite similar to those of modern humans except that the heel is narrower and the sole lacks a proper arch. By contrast, the 4.4 million year old Ardipithecus ramidus from Ethiopia, the oldest hominin known from reasonably complete fossils, has an ape-like foot. The researchers who described Ardipithecus argued that it is a direct ancestor of later hominins, implying that a human-like foot had not yet evolved at that time.

The new footprints, from Trachilos in western Crete, have an unmistakably human-like form. This is especially true of the toes. The big toe is similar to our own in shape, size and position; it is also associated with a distinct 'ball' on the sole, which is never present in apes. The sole of the foot is proportionately shorter than in the Laetoli prints, but it has the same general form. In short, the shape of the Trachilos prints indicates unambiguously that they belong to an early hominin, somewhat more primitive than the Laetoli trackmaker. They were made on a sandy seashore, possibly a small river delta, whereas the Laetoli tracks were made in volcanic ash.
And now, the other shoe.  How do we know how old the fossil footprints are?  
The coastal rocks at Trachilos, west of Kissamos Harbour in western Crete (Fig. 1a–c), lie within the Platanos Basin, and present a succession of shallow marine late Miocene carbonates and siliciclastics of the Roka Formation, a local development of the Vrysses Group (Freudenthal, 1969 ; van Hinsbergen and Meulenkamp, 2006; Figs. 1d, e and 3a, b). At the top, this marine succession terminates abruptly in the coarse-grained terrigenous sedimentary rocks of the Hellenikon Group (Figs. 1d and 3e, f), which formed by the desiccation of the Mediterranean Basin during the Messinian Salinity Crisis (van Hinsbergen and Meulenkamp, 2006), an event dated to approximately 5.6 Ma (Govers, 2009). The succession (Fig. 1d) contains an emergent horizon with well-preserved terrestrial trace fossils and microbially induced sedimentary structures (Fig. 3d) immediately overlying shallow water ripplemark structures (Fig. 3c).1
So, the authors are a tad more circumspect than the writers of the PhysOrg story.  The authors posit two hypotheses for their results: 1. the tracks represent the gait of a basal hominin, which explains the non-divergence and shape of the big toe as well as the shape of the ends of the other toes, which resemble those of a human foot and not a non-human foot.  This fits approximately with the dates of the north African remains of Orrorin and, perhaps, that of Sahelanthropus (although that is pretty much a surface find).

The Messinian Crisis was a period of time during the Miocene epoch during which the Mediterranean Sea almost completely dried up.  This crisis began around 6 million years ago and ended around 5.3 million years ago with what is known as the Zanclean flood.  It is estimated that once the barrier at the Strait of Gibraltar was broken, the Mediterranean Sea refilled within two years, which means that the sea level rose at an estimated 30 feet per day.

Okay...now, lets go back here, to the story that came out about four months ago, establishing the possibility that the last common ancestor to apes and humans was in Europe.  In that study, a jaw with human root patterns and an isolated premolar that have both been attributed to Graecopithecus, were re-examined and found by the researchers to have hominin affinities, a surprising conclusion, given their age of 7.15 million years.  At the time that story appeared, I remarked that it was a bit of a stretch to hang one's hat on one premolar and partial ape-like mandible, but in the context of the new finds, maybe not so much.  This strengthens the (admittedly far-fetched) notion that our ancestors did, in fact, originate somewhere in southeast Mediterranean Europe and, over the course of the next two and half million years ago, migrated south to north Africa.

As Per Ahlberg was quoted as saying:
"This discovery challenges the established narrative of early human evolution head-on and is likely to generate a lot of debate. Whether the human origins research community will accept fossil footprints as conclusive evidence of the presence of hominins in the Miocene of Crete remains to be seen."
This is huge news.  Even if we can't place the LCA in southern Europe, we now have bipedalism extending back into the late Miocene. 


1Gerard D. Gierliński et al, Possible hominin footprints from the late Miocene (c. 5.7 Ma) of Crete?, Proceedings of the Geologists' Association (2017). DOI: 10.1016/j.pgeola.2017.07.006


Will Moroccan Schools Teach Evolution Again

Writing for the Morocco World News, Amal Ben Hadda wonders if the discovery of more early modern human remains from the site of Jebel Irhoud will prompt the government to reintroduce evolution into the curriculum:
While these new discoveries are “shaking up” the scientific community, we should ask ourselves why these theories of evolution are not being taught in Moroccan schools. Why is this scientific approach to revealing the origin of humanity not considered in the manuals programs?

From a religious perspective, some Muslim scholars support the study of human evolutionary theory. The different levels of human conception are mentioned in many verses in the Quran. However, the exegeses of these verses have been influenced by Talmudic interpretations of the Torah and have been accepted as authentic versions of the human “genesis”. As an example of this influence, there is the creation of woman from Adam’s rib. This version, interpreted from the Torah and resumed by mainstream Islamic exegeses, doesn’t exist in the Quran.

In the original text of the Torah, the chapter Genesis shows in 1:27 that man and woman were conceived at the same level and no one is superior to another. However, this woman was diabolized by the patriarchal tradition. Only the version of the creation of woman from Adam’s rib named Eve is considered by the creationists as per the interpretations of the Genesis 2:23.
It is interesting to note that Islam seems to have the same issue that Christianity does in that modern interpretations of scripture have taken hold within a large subset of Muslims regarding this issue.  In Christianity, the days of creation were never originally written as seven sequential, 24-hour periods, yet that is the perspective of a large number of conservative evangelical Christians.  He author calls for a neutral interpretation of the Koran.  I would argue that we need a similar interpretation of the Bible. 

Friday, September 01, 2017

Meanwhile, Over in South Korea...

The Korea Times is running a story about the controversy over creationism in South Korea.  Park Jae-hyuk writes:
The deep-rooted dispute over creationism has arisen here again after Park Seong-jin, the designate for SMEs and startups minister, was found to have worked for an institute supporting what most scientists regard as pseudoscience.

Creationism is a fundamentalist Christian movement that denies the theory of evolution and considers Biblical creation stories as proven facts.

Although Park told reporters this week that he “respects” the theory of evolution despite his religious beliefs, controversy over the issue will highly likely go on, given that opposition parties are expected to mention it during the upcoming confirmation hearing.

“As a Christian, I have a faith in a religion based on creation, but I do not believe creation as a science,” the minister nominee told reporters. “I’ve never individually studied creation science either.”

In response to his remarks during a symposium at Yonsei University in 2007 that “People armed with belief in creation should be deployed in every fields of society,” Park explained the remarks were just made for guests from the United States.

Saying that faith is not subject to qualification, Cheong Wa Dae has dismissed the controversy. Park quit his position as director at the Korea Association for Creation Research (KACR) just a day before his nomination.
It is not a given that this will create problems for South Korean science any more than the appointment of Betsy DeVos will in this country. That is predicated, however, on the idea that the two forms of government are broadly similar in behavior. If they are not, then things could change.Stay tuned. 

Tuesday, August 22, 2017

More Bad News From Turkey

It seems that, in Turkey, there will be no teaching of evolution any longer.  NPR reports:
When children in Turkey head back to school this fall, something will be missing from their textbooks: any mention of evolution.

The Turkish government is phasing in what it calls a values-based curriculum. Critics accuse Turkey's president of pushing a more conservative, religious ideology — at the expense of young people's education.

At a playground in an upscale, secular area of Istanbul, parents and grandparents express concern over the new policy.

"I'm worried, but I hope it changes by the time my grandchildren are in high school," says Emel Ishakoglu, a retired chemical engineer playing with her grandchildren, ages 5 and 2. "Otherwise our kids will be left behind compared to other countries when it comes to science education."

With a curriculum that omits evolution, Ishakoglu worries her grandchildren won't get the training they'll need if they want to grow up to be scientists like her.
While it is certainly true that this kind of thing also happens sporadically in the United States, like here, what is going on in Turkey is entirely religiously-based.  The interpretation of scripture, in this case, the Koran, will always come first. 

Henry Morris was once asked where Hell was.  His response was that it was directly beneath our feet.  When pressed with the knowledge of observations that there is no place for Hell in the center of the earth because the earth is solid down to the core, he replied that the sounding equipment had to be wrong because that is where the scriptures tell us it is.  It is very hard to fight against that level of strict ideology.  

Wednesday, August 16, 2017

New DNA Analysis Allows for Greater Understanding of Modern Human Prehistory

From Science Daily:
A University of Utah-led team developed a new method for analyzing DNA sequence data to reconstruct the early history of the archaic human populations. They revealed an evolutionary story that contradicts conventional wisdom about modern humans, Neanderthals and Denisovans.

The study1 found that the Neanderthal-Denisovan lineage nearly went extinct after separating from modern humans. Just 300 generations later, Neanderthals and Denisovans diverged from each other around 744,000 years ago. Then, the global Neanderthal population grew to tens of thousands of individuals living in fragmented, isolated populations scattered across Eurasia.

"This hypothesis is against conventional wisdom, but it makes more sense than the conventional wisdom." said Alan Rogers, professor in the Department of Anthropology and lead author of the study that will publish online on August 7, 2017 in the Proceedings of the National Academy of Sciences.
As the authors note, there is mounting evidence of a migration from Africa to Europe, likely by way of the Strait of Gibraltar, in which Acheulean stone tools are introduced by a group which became known as Homo heidelbergensis.  This group, subsequently, split, likely gave rise to the Neandertals  and the Denisovans a bit later.  Then, a second wave of migrations around 90 to 100 ky happened, during which there was hybridization between Neandertals, moderns and Denisovans.

We live in a time where we now have the genomes of archaic Africans, Eurasians, Neandertals, Denisovans and early moderns and can compare them using site pattern analysis.  These authors found that
  • In contrast to previous studies, this one indicates that Neandertal population size was large, on the order of tens of thousands of people, in isolated populations
  • The split between the Neandertals and Denisovans was early, on the order of 744 thousand years ago.  
  • By the time you find these hominins in the fossil record, they had already split from the Denisovans, which explains why the Atapuerca Sima De Los Huesos hominins resemble Neandertals more than Denisovans.
  • Therefore, Neandertal features are thought to have emerged over a long period of time in Europe. 
This analysis will help us rethink our understanding of the fossil material from Gran Dolina, which now likely represents a population from which both the Denisovans and Neandertals split.  This makes sense, given the general, non-derived nature of the fossil material from there.  Things are slowly (maybe?) falling into place.

1Alan R. Rogers, Ryan J. Bohlender, and Chad D. Huff. Early history of Neanderthals and Denisovans. PNAS, August 2017 DOI: 10.1073/pnas.1706426114